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Eindhoven University of Technology (TU/e)

Assignment 2 Systems Biology course (8C060) 2011-2012
=Systems Biology Modeling competition=

This assignment consists of a ‘modeling competition’ in which different published models will be studied by small teams of students. The models:
 * 1) Cedersund G, Roll J, Ulfhielm E, Danielsson A, Tidefelt H, et al. (2008) Model-Based Hypothesis Testing of Key Mechanisms in Initial Phase of Insulin Signaling. PLoS Comput Biol 4(6): e1000096
 * 2) Lewis, J. Autoinhibition with transcriptional delay: a simple mechanism for the zebrafish somitogenesis oscillator. Current Biology (2003) 13: 1398–1408.
 * 3) Mescam, M, KC Vinnakota, and D Beard. Identification of the catalytic mechanism and estimation of kinetic parameters for fumarase. J Biol Chem (2011) 286(24): 21100-9.
 * 4) Zhou JX, Brusch L, Huang S (2011) Predicting Pancreas Cell Fate Decisions and Reprogramming with a Hierarchical Multi-Attractor Model. PLoS ONE 6(3): e14752

Further information is available on the course webpage of the educational portal of TU/e (OASE, login required).

Team wiki's:

> > > Team Remi is the runner-up > of the competition > Team BMRBMT is the winner of the 2012 modeling competition > congratulations > >  For information, contact Natal van Riel (n.a.w.v.riel 'at' tue.nl).  website: []
 * http://mzebra.wikispaces.com
 * http://blyg.wikispaces.com
 * http://remisysbio.wikispaces.com/
 * https://bmrbmt.wikispaces.com
 * https://initialphaseinsulin2.wikispaces.com/ (//Note, the URL of the wiki has changed!//)
 * http://fumarasesysbio.wikispaces.com